Project : Pipelining
Microarray data analysis
Overview
Goal
Tools
Timeline
Workflow
Overview
Microarray measures the simultaneous expression
levels of tens of thousands of genes in a given cell type.
Such data can yield significant insights into the underlying
biology of the cell. We achieve this by comprehensive
and step-by-step procedures.
Goal
The goal of this project is to create a high-throughput
platform for microarray data analysis.
This work includes:
Develop algorithms for removing systemtic effiects
Develop algorithms for supervised analysis
Develop algorithms for unsupervised analysis
Develop algorithms for recognizing patterns
Develop algorithms for visualization
Create software package for the above purposes
Tools(s/w)
Task | Software or Development language |
interface | HTML/Javascript/Perl |
analysis engine | R statistical package |
mining engine | C, Java |
visualization engine | SVG |
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