| 교육일 |
과목 |
시간 |
세부 교과목 |
교육방법 |
교육
장소 |
2월 16일
오전, 오후 |
Advanced Python Programming
- 1 -
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3 |
Advanced Python Programming 1
- Regular Expression
(Managin File, Greedy vs Non-Greedy Match, Main Methods)
- Python Visualization
(Matplotlib, Seaborn, Bokeh, Plotly)
| 실습 |
온라인
(zoom)
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Advanced Python Programming
- 2 -
|
3 |
Advanced Python Programming 2
- Python Machine Learning(TensorFlow, Keras, Theano)
- Medical Informatics Practice 1(MESH, ICD)
| 실습 |
온라인
(zoom)
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Advanced Python Programming
- 3 -
|
3 |
Advanced Python Programming 3
- Medical Informatics Practice 2
- SEER(The Cancer Surveillance, Epidermiology and End Results Program)
- CDC(Centers for Disease Control And Prevention) Mortality Files
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실습 |
온라인
(zoom)
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2월 17일
오전, 오후 |
Advanced R Programming
- 1 -
|
3 |
Data Processing
- Data Structure and File I/O
- Data Management
|
실습 |
온라인
(zoom)
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Advanced R Programming
- 2 -
|
3 |
Statistical Test and Visualization
- Regression Methods
- Advanced Visualization of Statistical Test with ggpubr
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실습 |
온라인
(zoom)
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Advanced R Programming
- 3 -
|
3 |
Machine learning
- Classification
- Decision tree and CART
|
실습 |
온라인
(zoom)
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2월 20일
오전, 오후 |
Advanced NGS Data Analysis
- 1 -
|
3 |
Epigenome Data Analysis
- Epigenetic Mechanisms
- DNA Methylation Analysis
- Histone Modification Analysis
- Discovery of Epigenetic Biomarkers
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강의
및
실습 |
온라인
(zoom)
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Advanced NGS Data Analysis
- 2 -
|
3 |
Pathway and Network Analysis
- Characteristics of Biological Network
- Cancer Gene Network Construction and Clustering
- Identification of Aberrant Pathway in Cancers
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강의
및
실습 |
온라인
(zoom)
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Advanced NGS Data Analysis
- 3 -
|
3 |
Multiomics and Precision Medicine
- Genome, Transcriptome, and Proteom Integration
- miRNA and Exosome Analysis
- Application for Precision Medicine
|
강의
및
실습 |
온라인
(zoom)
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2월 21일
오전, 오후 |
Methodology and Application for Next Generation Sequencing
- 1 -
|
3 |
NGS Platforms and Applications
- Current NGS Platforms
- NGS Data Formats
- NGS Data Analysis Technologies
- NGS Applications
|
강의
및
실습 |
온라인
(zoom)
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Methodology and Application for Next Generation Sequencing
- 2 -
|
3 |
NGS Data Analysis
- Sequence Alignment Algorithms
- Whole Genome and Exome Data Analysis
- Variation Detection and Reference Genome
|
강의
및
실습 |
온라인
(zoom)
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Methodology and Application for Next Generation Sequencing
- 3 -
|
3 |
Informatics for Cancer immunotherapy
- Genomics in cancer immunotherapy
- Tumor mutation burden(TMD) and neoantigen
- Gene expression and immune cells
| 강의
및
실습 |
온라인
(zoom)
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2월 22일
오전, 오후 |
Advanced Python Programming
- 1 -
|
3 |
Biomedical data analysis using Python
- Bioinformatics Practice
- Python Machine Learning
|
실습 |
온라인
(zoom)
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Advanced R Programming
- 2 -
|
3 |
Expression and variants association using R
- Statistical test for association (Chi-square, Fihser’s exact test and Odds ratio)
- eQTL analysis
|
실습 |
온라인
(zoom)
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Advanced R Programming
- 3 -
|
3 |
Cancer analysis using R
- Cancer somatic mutation analysis
- Pathway analysis
- Network visualization
|
실습 |
온라인
(zoom)
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2월 23일
오전, 오후 |
Cancer Genome and Multi-omic Bioinformatics
- 1 -
|
3 |
The Cancer Genome Atlas (TCGA) Project and Cancer Genome Research
- TCGA Introduction
- TCGA Data and Scientific Findings
- Impact of TCGA and Future
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강의
및
실습 |
온라인
(zoom)
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Cancer Genome and Multi-omic Bioinformatics
- 2 -
|
3 |
Advanced Cancer Genome Data Analysis
- Different types of variation in cancer
- Matched normal and tumor pair data analysis
- Cancer clonality and sequencing depth
- Visualizing cancer genomics data
|
강의
및
실습 |
온라인
(zoom)
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Cancer Genome and Multi-omic Bioinformatics
- 3 -
|
3 |
Exome Sequencing Analysis
- Exome Sequencing Data
- Study Design and Workflow
- Exome Sequencing of Familial Disease
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강의
및
실습 |
온라인
(zoom)
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2월 24일
오전, 오후 |
RNA-Seq and Transcriptome Data Analysis
- 1 -
|
3 |
RNA-Seq Data Analysis
- Read Alignment Methods
- Expression Quantification Strategy
- Differentially Expressed Genes Identification
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강의
및
실습 |
온라인
(zoom)
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RNA-Seq and Transcriptome Data Analysis
- 2 -
|
3 |
Sequence-level Transcriptome Analysis
- Alternative Splicing Events
- Alternative Polyadenylation Analysis
- RNA Editing Analysis
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강의
및
실습 |
온라인
(zoom)
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RNA-Seq and Transcriptome Data Analysis
- 3 -
|
3 |
Non-coding RNA Analysis
- miRNA-seq Expression Profile Analysis
- Novel Transcript Discovery
- Non-coding RNA Characterization
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강의
및
실습 |
온라인
(zoom)
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