PSB 2002

Human Genome Variation: Disease, Drug Response, and Clinical Phenotypes

Singular Value Decomposition Regression Models for Classification of Tumors from Microarray Experiments

D. Ghosh; Pacific Symposium on Biocomputing 7:18-29 (2002).

A Cellular Automata Approach to Detecting Interactions Among Single-nucleotide Polymorphisms in Complex Multifactorial Diseases

J.H. Moore and L.W. Hahn; Pacific Symposium on Biocomputing 7:53-64 (2002).

Literature Data Mining for Biology

Predicting the Sub-Cellular Location of Proteins from Text Using Support Vector Machines

B.J. Stapley, L.A. Kelley, and M.J.E. Sternberg; Pacific Symposium on Biocomputing 7:374-385 (2002).

Genome, Pathway and Interaction Bioinformatics

Combining Location and Expression Data for Principled Discovery of Genetic Regulatory Network Models

A.J. Hartemink, D.K. Gifford, T.S. Jaakkola, and R.A. Young; Pacific Symposium on Biocomputing 7:437-449 (2002).

Genome-Wide Pathway Analysis and Visualization Using Gene Expression Data

M.P. Kurhekar, S. Adak, S. Jhunjhunwala, and K. Raghupathy; Pacific Symposium on Biocomputing 7:462-473 (2002).

Guiding Revision of Regulatory Models with Expression Data

J. Shrager, P. Langley, and A. Pohorille; Pacific Symposium on Biocomputing 7:486-497 (2002).

Discovery of Causal Relationships in a Gene-Regulation Pathway from a Mixture of Experimental and Observational DNA Microarray Data

C. Yoo, V. Thorsson, and G.F. Cooper; Pacific Symposium on Biocomputing 7:498-509 (2002).

Proteins: Structure, Function and Evolution

The Spectrum Kernel: A String Kernel for SVM Protein Classification

C. Leslie, E. Eskin, and W.S. Noble; Pacific Symposium on Biocomputing 7:566-575 (2002).

Support Vector Machine Prediction of Signal Peptide Cleavage Site Using a New Class of Kernels for Strings

J.-P. Vert; Pacific Symposium on Biocomputing 7:649-660 (2002).